WHAT IT CONNECTS
What wjlim nf core mcp gives an AI Agent
- List local nf-core repositories (rnaseq, sarek, modules, tools)
- Access pipeline configurations and workflows
- Search through pipeline files
- Explore pipeline modules
- **Clone the repositories**:
- **Directory Structure**:
- **Verify Installation**:
SECURITY
An MCP listing is not a security review
An MCP server may receive model context, credentials, local files, or permission to call external systems. Review its code, requested environment variables, network behavior, package provenance, and maintenance status before connecting it to an agent.